Browse Source

Completada man page de ggheatmap.

main
Costa 2 years ago
parent
commit
87697a5ded
1 changed files with 14 additions and 2 deletions
  1. +14
    -2
      man/ggheatmap.Rd

+ 14
- 2
man/ggheatmap.Rd

@ -2,11 +2,23 @@
\alias{ggheatmap}
\title{ggheatmap}
\usage{
ggheatmap(x)
ggheatmap(df, x=NULL, y=NULL, value=NULL, grouping="mean")
}
\arguments{
\item{df}{A data frame in "long" format.}
\item{x}{The variable that will be used for X axis in the heatmap. If not specified, the first column will be used.}
\item{y}{The variable that will be used for Y axis in the heatmap. If not specified, the second column will be used.}
\item{value}{The variable that will be used for colouring the heatmap. If not specified, the third column will be used.}
\item{grouping}{The function that will be used to group if there is more than one observation for each X-Y combination. "mean" or "median" are posible, defaulting to "mean".}
}
\description{
Generates a heatmap using ggplot for a dataframe.
}
\examples{
ggheatmap()
library(tidyverse)
df<-data.frame("pats"=paste0("PAT", 1:20), "CytA"=rnorm(20,5), "CytB"=rnorm(20,5),"CytC"=c(rnorm(5,10),rnorm(5,5),rnorm(5,10),rnorm(5,5)),"CytD"=rnorm(20,5),"CytE"=c(rnorm(5,10),rnorm(5,5),rnorm(5,10),rnorm(5,5)),"CytF"=rnorm(20,5),"CytG"=c(rnorm(5,10),rnorm(5,5),rnorm(5,10),rnorm(5,5))) %>% gather(Cyt, Value,-pats)
head(df)
ggheatmap(df)
}

Loading…
Cancel
Save