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fb62bdf49d
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e57141aa22
| Author | SHA1 | Date | |
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| e57141aa22 | |||
| bd98a08c31 |
@@ -16,7 +16,21 @@ ggheatmap<-function(df, x=NULL, y=NULL, value=NULL, grouping="mean", exclude_gro
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if (grouping == "median"){
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df<-df %>% summarise(Value=median(Value)) %>% ungroup
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}
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if (length(unique(df$VarX)) > 1 & length(unique(df$VarY)) > 1){
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order<-clustsort(df %>% spread(VarY,Value) %>% select(!all_of(exclude_group)) %>% as.data.frame)
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}else{
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order<-list()
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if (length(unique(df$VarX)) > 1){
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xhclust<-clustsort(df %>% spread(VarY,Value) %>% select(!all_of(exclude_group)) %>% as.data.frame)
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order[["x"]]<-pull(xhclust, 1)[hclust(dist(xhclust %>% select(-1)))$order]
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}else{order[["x"]]<-df %>% pull(VarX) %>% unique}
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if (length(unique(df$VarY)) > 1){
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yhclust<-clustsort(df %>% spread(VarY,Value) %>% select(!all_of(exclude_group)) %>% as.data.frame)
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order[["y"]]<-colnames(yhclust)[2:ncol(yhclust)][hclust(dist(t(yhclust %>% select(-1))))$order]
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}else{order[["y"]]<-df %>% pull(VarY) %>% unique}
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}
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if (scale != "none"){
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if (scale == "rows"){
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