\name{ggcorrplot} \alias{ggcorrplot} \title{ggcorrplot} \usage{ ggcorrplot(df, var, value, color="#FFFFFF00", stat="signif", tri="all", method="pearson") } \arguments{ \item{df}{A data frame in "long" format.} \item{var}{The column that will be used to analyze correlation all against all.} \item{value}{The column that will be used as numeric data to analyze correlation.} \item{color}{The color of the lines of geom_tile (the border). By default, its transparent.} \item{stat}{The stats that will be on the tiles. They can be "signif", "pval", "none". By default, it presents "signif" (stars representing pvalue).} \item{tri}{It specifies which half of the correlation matrix is shown. Can be "all" (the default), "upper" or "lower".} \item{method}{Method for correlation. It will be passed to "cor" and "rcorr" functions, "pearson" by default.} } \description{ Generates a correlation matrix using ggplot for a dataframe. } \examples{ library(tidyverse) df<-data.frame("pats"=paste0("PAT", 1:20), "CytA"=rnorm(20,5), "CytB"=rnorm(20,5), "CytC"=c(rnorm(5,10),rnorm(5,5),rnorm(5,10),rnorm(5,5)),"CytD"=rnorm(20,5), "CytE"=c(rnorm(5,10),rnorm(5,5),rnorm(5,10),rnorm(5,5)),"CytF"=rnorm(20,5), "CytG"=c(rnorm(5,10),rnorm(5,5),rnorm(5,10),rnorm(5,5))) df<-gather(df, Cyt, Value,-pats) head(df) ggcorrplot(df, Cyt, Value) }