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@ -220,7 +220,7 @@ server <- function(input, output) { |
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ranPeaks<-range(picks$rows) |
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ranPeaks<-range(picks$rows) |
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obj$plot<-obj_ab@traceMatrix %>% as.data.frame() %>% rename(A=V1,C=V2,G=V3,T=V4) %>% add_column(rows=1:nrow(.)) %>% |
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obj$plot<-obj_ab@traceMatrix %>% as.data.frame() %>% dplyr::rename(A=V1,C=V2,G=V3,T=V4) %>% add_column(rows=1:nrow(.)) %>% |
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filter(rows >= ranPeaks[1] & rows <= ranPeaks[2]) %>% gather(Base, Value, -rows) %>% |
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filter(rows >= ranPeaks[1] & rows <= ranPeaks[2]) %>% gather(Base, Value, -rows) %>% |
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mutate(Base=factor(Base, levels=c("G","A","T","C"))) %>% |
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mutate(Base=factor(Base, levels=c("G","A","T","C"))) %>% |
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ggplot(aes(rows, Value))+ |
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ggplot(aes(rows, Value))+ |
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