diff --git a/invivos/app.R b/invivos/app.R index 0d3eb8e..a3bd72e 100755 --- a/invivos/app.R +++ b/invivos/app.R @@ -148,19 +148,19 @@ server <- function(input, output) { df<-df[!is.na(df$Volume),] up_cuttof<-input$upcut low_cuttof<-input$lowcut - print(up_cuttof) + # print(up_cuttof) df<-df[df$Volume < up_cuttof & df$Volume >= low_cuttof,] df<-merge(df, dades$sex) # df["Mouse"]<-gsub("[a-zA-Z]", "", df$MouseID) - print(df$Volume) + # print(df$Volume) s<-shapiro.test(df$Volume)[[2]] ngroup<-length(dades$groups) df_def<-list() - print(head(df)) + # print(head(df)) for (sex.var in c("male","female")){ - print(sex.var) + # print(sex.var) df_sex<-df %>% filter(`sex` == sex.var) ind.list<-list() pval.list<-list() @@ -191,7 +191,7 @@ server <- function(input, output) { } } index<-which(unlist(lvn.list) == min(unlist(lvn.list)[which(unlist(pval.list) %in% sort(unlist(pval.list), decreasing = T)[1:20])])) - print(df_sex) + # print(df_sex) df_def[[sex.var]]<-merge(df_sex %>% select(-group), ind.list[[index]]) } # df_def<-do.call(rbind, c(df_def, make.row.names=F)) @@ -347,7 +347,7 @@ server <- function(input, output) { } table<-melt(table, id=colnames(table)[colnames(table) %in% col_nodays], variable.name = "Timepoint") table$Timepoint<-gsub("[A-Za-z ]","",table$Timepoint) - print(table) + # print(table) if ("DPV" %in% colnames(table)){ table<-dcast(table, Cage+`ID animal`+`ID tumor`+Group+Timepoint~DPV, value.var = "value") table$Major<-table$Major @@ -398,7 +398,7 @@ server <- function(input, output) { if (!is.null(input$file_analy) & !is.null(analysis$taula_def)){ observeEvent(analysis$taula_def, {}) table<-analysis$taula_def - print(table , ) + print(table) if (input$vacc == "Sí"){ ggplot(table, aes(as.numeric(as.character(Timepoint)), Volume, color=Group, group=`ID animal`))+ # geom_errorbar(stat="summary", width=0.05)+