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library(shiny) |
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library(Seurat) |
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library(shinyFiles) |
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library(ggplot2) |
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# Define UI for application |
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ui <- fluidPage( |
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# Application title |
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titlePanel("scMonitor"), |
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sidebarLayout( |
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sidebarPanel( |
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shinyFilesButton("file", label="Select File", title="Select a Seurat Object", multiple=F) |
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), |
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mainPanel( |
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plotOutput("umapPlot") |
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) |
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) |
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) |
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# Define server logic required to draw a histogram |
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server <- function(input, output) { |
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dades<-reactiveValues() |
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dades$seu<-NULL |
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volumes <- c(Home = fs::path_home(), "R Installation" = R.home(), getVolumes()()) |
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shinyFileChoose(input, 'file', roots=volumes) |
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observe({ |
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if (!is.integer(input$file)){ |
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print(parseFilePaths(volumes, input$file)) |
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dades$seu<-readRDS(parseFilePaths(volumes, input$file)$datapath) |
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} |
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}) |
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output$umapPlot <- renderPlot({ |
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observeEvent(dades$seu, {}) |
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if (!is.null(dades$seu)){ |
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DimPlot(dades$seu)+theme(aspect.ratio=1) |
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} |
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}) |
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} |
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# Run the application |
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shinyApp(ui = ui, server = server) |