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@ -71,7 +71,7 @@ transform_gs<-function(gs, saveparams=NULL, trans_params_obj=NULL, index=1){ |
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if (is.null(trans_params_obj)){ |
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if (is.null(trans_params_obj)){ |
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log_mark<-colnames(gs)[!grepl("FS|SS|Time", colnames(gs))] |
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log_mark<-colnames(gs)[!grepl("FS|SS|Time", colnames(gs))] |
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trans_params<-lapply(log_mark, function(x) list(channel=x, scale="biexp",maxvalue=250000,pos=4, widthBasis=-400, max=5, min=0)) |
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trans_params<-lapply(log_mark, function(x) list(channel=x, scale="biexp",maxvalue=250000,pos=4, widthBasis=-400, max=10^3.7, min=0)) |
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names(trans_params)<-log_mark |
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names(trans_params)<-log_mark |
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log_mark_lin<-colnames(gs)[grepl("FS|SS|Time", colnames(gs))] |
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log_mark_lin<-colnames(gs)[grepl("FS|SS|Time", colnames(gs))] |
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trans_params_lin<-lapply(log_mark_lin, function(x) list(channel=x, scale="lin", |
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trans_params_lin<-lapply(log_mark_lin, function(x) list(channel=x, scale="lin", |
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