Inicio del programa
This commit is contained in:
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library(shiny)
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library(coRdon)
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library(Biostrings)
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library(tidyverse)
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library(pcaMethods)
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library(ggpubr)
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# Define UI for application that draws a histogram
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ui <- fluidPage(
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verticalLayout(
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titlePanel("ONATRY-CIT"),
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wellPanel(
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textAreaInput("query", "Text in fasta format", width = "100%", height = "300px"),
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actionButton("submit", label = "Submit")
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),
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plotOutput("result", width = "1200px", height = "800px")
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)
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)
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# Define server logic required to draw a histogram
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server <- function(input, output) {
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process<-eventReactive(input$submit, {
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fa=input$query
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fasplit<-strsplit(gsub("^>","",fa), ">")[[1]]
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txtQuery<-c()
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names<-c()
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for (i in 1:length(fasplit)){
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query_split<-strsplit(fasplit[[i]], "\n|\r")[[1]]
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names<-c(names, strsplit(query_split[1], " ")[[1]][1])
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txtQuery<-c(txtQuery, paste0(query_split[2:length(query_split)], collapse = ""))
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}
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names(txtQuery)<-names
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txtQuery<-gsub("\n","",txtQuery)
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dnaQuery<-DNAStringSet(txtQuery)
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Query<-codonTable(dnaQuery)
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CodRef<-list(
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Ala=c("GCG","GCA","GCT","GCC"),
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Cys=c("TGT","TGC"),
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Asp=c("GAT","GAC"),
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Glu=c("GAG","GAA"),
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Phe=c("TTT","TTC"),
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Gly=c("GGG","GGA","GGT","GGC"),
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His=c("CAT","CAC"),
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Ile=c("ATA","ATT","ATC"),
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Lys=c("AAG","AAA"),
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Leu=c("TTG","TTA","CTG","CTA","CTT","CTC"),
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Met=c("ATG"),
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Asn=c("AAT","AAC"),
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Pro=c("CCG","CCA","CCT","CCC"),
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Gln=c("CAG","CAA"),
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Arg=c("AGG","AGA","CGG","CGA","CGT","CGC"),
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Ser=c("AGT","AGC","TCG","TCA","TCT","TCC"),
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Thr=c("ACG","ACA","ACT","ACC"),
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Val=c("GTG","GTA","GTT","GTC"),
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Trp=c("TGG"),
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Tyr=c("TAT","TAC"),
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End=c("TGA","TAG","TAA")
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)
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UsedCodons<-unlist(CodRef[sapply(CodRef,length) > 1 & names(CodRef) != "End"])
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list2data<-function(x, var.column="Names", val.column="Values"){
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names<-c()
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for (name in names(x)){
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names<-c(names, rep(name, length(x[[name]])))
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}
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df<-data.frame(names, unlist(x), row.names = NULL)
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colnames(df)<-c(var.column, val.column)
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return(df)
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}
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Query_CU<-t(codonCounts(Query)) %>%
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as.data.frame() %>%
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setNames(names(txtQuery)) %>%
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rownames_to_column("codon") %>%
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# mutate(across(all_of(names(txtQuery)), function(x) x=1000*x/sum(x))) %>%
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merge(list2data(CodRef, "AA","codon")) %>%
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group_by(AA) %>%
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mutate(across(all_of(names(txtQuery)), function(x) x=x/sum(x))) %>%
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ungroup()
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pca_ref<-read.table("../Scripts/pca_HAdV5_EGFP_MONO_EMM_BH_VCN_APIS_MOD_PDT_ADAPT_Tox.txt",sep="\t", dec = ",", header = T)
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pca_ref$codon<-gsub(" ","",pca_ref$codon)
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pca_tab<-merge(pca_ref,
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Query_CU %>% select(-AA)
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)
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pcares<-pca(pca_tab %>% column_to_rownames("codon") %>% as.matrix %>% t(),
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method="svd", nPCs=10) #comando para hacer el PCA
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g_PCA<-pcares@scores %>%
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as.data.frame %>%
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rownames_to_column("NAME") %>%
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add_column("TYPE"=c(rep("Structural", 20),rep("Early",16), rep("References", 6),
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rep("Query",length(names(txtQuery))))) %>%
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ggplot(aes(PC1,PC2, color=TYPE))+
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geom_point(size=15, alpha=0.25)+
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geom_point(data=function(x){filter(x, TYPE %in% c("References","Query"))},size=2, alpha=0.5)+
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geom_text(aes(label=NAME),show.legend=FALSE)+
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scale_color_manual(values=c("Early"="cornflowerblue","Structural"="darkgrey","References"="brown","Query"="black"))+
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theme_gray(base_size = 15)+
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ggtitle("PCA Codon Usage")+
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theme(aspect.ratio = 1)
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hcu<-read.table("../Scripts/Human.Codon.Usage", header = F, sep=" ")
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hcu<-rbind(
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hcu[,c("V1","V2")] %>% rename(Codon=V1, Usage=V2),
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hcu[,c("V3","V4")] %>% rename(Codon=V3, Usage=V4),
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hcu[,c("V5","V6")] %>% rename(Codon=V5, Usage=V6),
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hcu[,c("V7","V8")] %>% rename(Codon=V7, Usage=V8)
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) %>%
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mutate(Usage=as.numeric(gsub("\\([0-9]*\\)","",Usage)))
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w<-merge(
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list2data(CodRef, "AA","Codon"),
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hcu
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) %>%
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group_by(AA) %>%
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mutate(Weight=Usage/max(Usage))
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Query_codons<-sapply(txtQuery, function(x) substring(x,seq(1,(nchar(x)-2),3), seq(3,nchar(x),3)))
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Query_CAI<-do.call(rbind, lapply(names(Query_codons), function(x){
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merge(
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data.frame(Position=1:length(Query_codons[[x]]),
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Codon=Query_codons[[x]],
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Name=x),
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w[,c("Codon","AA","Weight")]
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) %>% arrange(Position)
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}))
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Query_CAI[Query_CAI$AA %in% c("Met","End","Trp"),"Weight"]<-0
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#CAI
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CAI<-Query_CAI %>% group_by(Name) %>%
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summarise(mean=round(mean(Weight),digits = 2))
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lengths<-Query_CAI %>% group_by(Name) %>% summarise(lengths=length(Weight))
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lowess<-Query_CAI %>% group_by(Name) %>%
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summarise(Weight=tail(lowess(Weight, f=0.15)$y,1))
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g_CAI<-ggplot(Query_CAI, aes(Position, Weight, color=Name))+
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geom_line(color=rgb(1,1,1,0.0))+
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geom_smooth(se=F)+
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geom_text(data=data.frame(Position=lengths$lengths+3,
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Weight=lowess$Weight,
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CAI=CAI$mean,
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Name=CAI$Name),
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aes(label=CAI), hjust=0, vjust=0.5, show.legend = F)+
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ggtitle("CAI along sequence")+
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theme_gray(base_size = 15)
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AApos3<-sapply(txtQuery, function(x) strsplit(x, "")[[1]][seq(3, nchar(x), 3)])
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GC3<-sapply(AApos3, function(x) 100*length(x[x %in% c("G","C")])/length(x))
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table<-rbind(
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read.table("../Scripts/tabla_cai_human_proteins.txt",header=TRUE,sep="\t",dec=".") %>% add_column(Type="Human"),
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read.table("../Scripts/tabla_cai_early_proteins.txt",header=TRUE,sep="\t",dec=".") %>% add_column(Type="Early"),
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read.table("../Scripts/tabla_cai_late_proteins.txt",header=TRUE,sep="\t",dec=".") %>% add_column(Type="Late")
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)
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dtGC3<-data.frame(
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Name=c("LGFP", "EGFP","BWT","BHU",names(GC3)),
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X.G.C.3.=c(44.8,96.7,70.8,84.9,GC3),
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Type=factor(c("Low Expression","High Expression","High Expression","High Expression",rep("Query",length(GC3))),
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levels = c("Early","Late","Human","High Expression","Low Expression","Query"))
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)
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table$Type<-factor(table$Type, levels=c("Early","Late","Human","High Expression","Low Expression","Query"))
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g_GC3<-ggplot(table, aes(`X.G.C.3.`, fill=Type))+
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geom_density(alpha=0.5)+
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geom_density(fill=NA, aes(color=Type))+
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scale_fill_manual(values=c("Early"="grey80","Late"="grey30", "Human"="#FFFF99",
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"Low Expression"="red","High Expression"="green","Query"="purple"),drop=F)+
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scale_color_manual(values=c("Early"="grey30","Late"="grey30", "Human"="#FFFF99",
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"Low Expression"="red","High Expression"="green","Query"="purple"),drop=F)+
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geom_segment(data=dtGC3, aes(x = X.G.C.3.,xend = X.G.C.3., y=0, yend=0.025, color=Type), linetype=2, linewidth=1, show.legend = F)+
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geom_text(data=dtGC3, aes(x = X.G.C.3., y=0.026, label=Name, color=Type), angle=90, vjust=0.5, hjust=0, size=6, show.legend = F)+
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xlim(0,100)+
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labs(x="%GC3",y="Density")+
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theme_classic(base_size = 15)+
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ggtitle("%GC3")+
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theme(panel.border = element_rect(fill=NA), aspect.ratio = 1)
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ggarrange(
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ggarrange(g_PCA, g_GC3),
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g_CAI, ncol = 1, heights = c(0.6, 0.4)
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)
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})
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output$result <- renderPlot({
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observeEvent(input$submit, {})
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if(input$query != ""){
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process()
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}
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})
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}
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# Run the application
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shinyApp(ui = ui, server = server)
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@@ -0,0 +1,19 @@
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TTT 17.1(189379) TCT 15.4(171196) TAT 12.0(132715) TGT 10.6(117458)
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TTC 19.5(216388) TCC 17.7(196012) TAC 14.6(161579) TGC 12.2(135489)
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TTA 7.8(86682) TCA 12.5(139095) TAA 0.5(5404) TGA 0.9(9518)
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TTG 12.9(143507) TCG 4.5(50249) TAG 0.4(4328) TGG 12.1(134648)
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CTT 13.3(147569) CCT 17.9(198345) CAT 11.1(123609) CGT 4.5(49921)
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CTC 19.2(212802) CCC 20.3(225420) CAC 15.2(168062) CGC 10.5(115976)
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CTA 7.2(79488) CCA 17.3(192119) CAA 12.7(140427) CGA 6.2(68859)
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CTG 39.4(437308) CCG 7.3(81354) CAG 34.9(387120) CGG 11.7(129331)
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ATT 15.8(175259) ACT 13.3(147134) AAT 17.1(190114) AGT 12.6(139465)
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ATC 19.9(220634) ACC 18.4(203602) AAC 18.6(206688) AGC 19.9(220505)
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ATA 7.5(82922) ACA 15.1(167136) AAA 25.1(278169) AGA 12.0(133268)
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ATG 21.3(236510) ACG 6.0(66200) AAG 31.9(353825) AGG 11.9(131616)
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GTT 10.9(121302) GCT 18.4(204091) GAT 22.3(246943) GGT 10.6(117456)
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GTC 14.0(155761) GCC 28.1(311996) GAC 25.1(278549) GGC 22.3(247607)
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GTA 7.1(78882) GCA 16.1(178106) GAA 30.4(336665) GGA 16.5(183190)
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GTG 27.6(305878) GCG 7.6(84501) GAG 40.7(451726) GGG 16.5(182999)
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@@ -0,0 +1,60 @@
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codon IV2a pol U_exon pTP 52K pIIIa III fiber pVII V X pVI hexon protease DBP 100K 33K IX 22K pVIII E3_12_5K E3_CR1_alpha0 E3_gp19K 10_5K E3_RID_alpha E3_RID_beta E3_14_7K E4_ORF6_7 E4_34K E4_ORF4 E4_ORF3 E4_ORFB E1B55K E1A E1B19K E4_ORF1 GFP_DEopt APIS_BH OPT_BH GFP_opt PH20 Tox
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GCG "0,24" "0,26" "0,33" "0,14" "0,4" "0,47" "0,36" "0,05" "0,36" "0,44" "0,45" "0,18" "0,15" "0,07" "0,62" "0,19" "0,35" "0,05" "0,17" "0,37" "0,17" 0 "0,1" "0,29" "0,38" "0,2" "0,25" "0,2" "0,14" "0,36" 0 "0,13" "0,11" "0,29" "0,29" "0,1" 0 "0,57" 0 0 0 "0,32"
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GCA "0,18" "0,12" "0,33" "0,08" "0,2" "0,18" "0,2" "0,2" "0,12" "0,09" "0,09" "0,12" "0,11" 0 "0,06" "0,15" "0,41" "0,27" "0,33" "0,05" "0,17" 0 "0,1" 0 "0,13" "0,1" "0,25" 0 0 "0,09" 0 "0,13" "0,28" "0,07" "0,07" "0,1" "0,88" "0,04" "0,04" 0 "0,26" "0,21"
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GCT "0,12" "0,06" 0 "0,03" "0,13" "0,1" "0,13" "0,32" "0,09" "0,09" 0 "0,06" "0,31" "0,07" "0,13" "0,12" "0,15" "0,27" "0,22" "0,26" "0,17" 0 "0,6" "0,14" "0,25" "0,2" 0 "0,6" "0,29" "0,36" "0,38" "0,5" "0,33" "0,29" "0,43" "0,5" "0,13" "0,04" "0,22" 0 "0,48" "0,25"
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GCC "0,45" "0,56" "0,33" "0,75" "0,27" "0,25" "0,31" "0,43" "0,42" "0,38" "0,45" "0,65" "0,44" "0,86" "0,19" "0,54" "0,09" "0,41" "0,28" "0,32" "0,5" 1 "0,2" "0,57" "0,25" "0,5" "0,5" "0,2" "0,57" "0,18" "0,63" "0,25" "0,28" "0,36" "0,21" "0,3" 0 "0,35" "0,74" 1 "0,26" "0,22"
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TGT "0,14" "0,08" 0 "0,29" 0 0 0 1 0 0 0 0 "0,29" "0,5" "0,15" "0,14" 0 0 "0,33" 0 "0,56" "0,5" "0,38" 0 "0,33" "0,2" "0,33" 1 "0,63" "0,75" "0,33" "0,5" "0,52" "0,5" "0,67" 1 1 0 0 0 "0,64" "0,83"
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TGC "0,86" "0,92" 0 "0,71" 1 0 1 0 0 0 1 1 "0,71" "0,5" "0,85" "0,86" 1 0 "0,67" 0 "0,44" "0,5" "0,63" 1 "0,67" "0,8" "0,67" 0 "0,38" "0,25" "0,67" "0,5" "0,48" "0,5" "0,33" 0 0 1 1 1 "0,36" "0,17"
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GAT "0,31" "0,21" "0,5" "0,31" "0,31" "0,17" "0,23" "0,48" "0,17" "0,47" 0 "0,4" "0,39" "0,4" "0,33" "0,23" "0,17" "0,71" 0 "0,11" "0,5" 0 "0,33" "0,67" 0 "0,6" "0,43" "0,67" "0,89" "0,33" "0,71" "0,57" "0,73" "0,44" "0,86" "0,5" "0,72" "0,36" "0,05" "0,11" "0,67" "0,82"
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GAC "0,69" "0,79" "0,5" "0,69" "0,69" "0,83" "0,77" "0,52" "0,83" "0,53" 0 "0,6" "0,61" "0,6" "0,67" "0,78" "0,83" "0,29" 1 "0,89" "0,5" 0 "0,67" "0,33" 1 "0,4" "0,57" "0,33" "0,11" "0,67" "0,29" "0,43" "0,27" "0,56" "0,14" "0,5" "0,28" "0,64" "0,95" "0,89" "0,33" "0,18"
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GAG "0,26" "0,66" "0,67" "0,59" "0,95" "0,84" "0,75" "0,26" 1 "0,61" 0 "0,67" "0,35" "0,67" "0,6" "0,68" "0,63" "0,67" "0,68" "0,5" "0,9" 0 "0,4" 0 "0,5" 0 "0,44" "0,6" "0,79" "0,33" "0,67" "0,63" "0,81" "0,63" "0,56" "0,86" "0,5" "0,67" "0,96" "0,94" "0,4" "0,5"
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GAA "0,74" "0,34" "0,33" "0,41" "0,05" "0,16" "0,25" "0,74" 0 "0,39" 0 "0,33" "0,65" "0,33" "0,4" "0,32" "0,38" "0,33" "0,32" "0,5" "0,1" 0 "0,6" 0 "0,5" 1 "0,56" "0,4" "0,21" "0,67" "0,33" "0,38" "0,19" "0,38" "0,44" "0,14" "0,5" "0,33" "0,04" "0,06" "0,6" "0,5"
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TTT "0,55" "0,46" 1 "0,48" "0,64" "0,42" "0,5" "0,89" "0,5" 1 0 "0,17" "0,6" "0,79" "0,47" "0,56" "0,5" "0,67" "0,25" "0,78" 1 "0,67" "0,63" "0,6" "0,83" "0,63" 1 1 1 "0,5" 1 1 "0,72" 1 "0,9" "0,82" "0,5" "0,25" "0,75" 0 "0,54" "0,67"
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TTC "0,45" "0,54" 0 "0,52" "0,36" "0,58" "0,5" "0,11" "0,5" 0 1 "0,83" "0,4" "0,21" "0,53" "0,44" "0,5" "0,33" "0,75" "0,22" 0 "0,33" "0,38" "0,4" "0,17" "0,38" 0 0 0 "0,5" 0 0 "0,28" 0 "0,1" "0,18" "0,5" "0,75" "0,25" 1 "0,46" "0,33"
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GGG "0,23" "0,19" 0 "0,22" "0,23" "0,32" "0,27" "0,1" "0,2" "0,1" 0 "0,13" "0,1" "0,33" "0,2" "0,11" 0 "0,33" "0,14" "0,18" 0 "0,4" 0 0 0 0 0 "0,13" "0,14" "0,25" "0,25" "0,4" "0,36" "0,33" "0,43" "0,11" 0 "0,26" 0 "0,14" "0,08" "0,15"
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GGA "0,19" "0,29" "0,33" "0,35" "0,19" "0,12" "0,11" "0,35" "0,07" "0,19" "0,27" "0,09" "0,21" "0,08" "0,2" "0,34" "0,67" "0,33" "0,14" "0,32" "0,57" 0 0 "0,75" 1 "0,4" "0,57" "0,38" "0,14" "0,25" "0,38" 0 "0,21" "0,07" 0 0 "0,45" "0,17" "0,35" 0 "0,6" "0,13"
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GGT "0,23" "0,16" "0,33" "0,05" "0,04" "0,15" "0,16" "0,19" "0,13" "0,19" "0,09" "0,17" "0,28" "0,17" "0,2" "0,21" "0,17" "0,17" "0,14" "0,14" "0,14" "0,4" "0,67" 0 0 0 "0,29" "0,13" "0,36" "0,5" "0,13" "0,4" "0,21" "0,47" "0,29" "0,67" "0,41" "0,13" 0 0 "0,24" "0,48"
|
||||
GGC "0,35" "0,35" "0,33" "0,38" "0,54" "0,41" "0,46" "0,35" "0,6" "0,52" "0,64" "0,61" "0,41" "0,42" "0,4" "0,34" "0,17" "0,17" "0,57" "0,36" "0,29" "0,2" "0,33" "0,25" 0 "0,6" "0,14" "0,38" "0,36" 0 "0,25" "0,2" "0,23" "0,13" "0,29" "0,22" "0,14" "0,43" "0,65" "0,86" "0,08" "0,25"
|
||||
CAT "0,21" "0,16" 0 "0,25" "0,36" "0,3" "0,3" "0,43" 0 "0,5" 0 0 "0,19" 0 "0,19" "0,25" "0,5" 0 "0,5" 0 "0,43" 0 "0,5" "0,33" "0,33" "0,5" 0 "0,67" "0,25" "0,5" "0,33" "0,75" "0,38" "0,27" "0,5" 0 "0,22" "0,75" 0 0 "0,33" "0,82"
|
||||
CAC "0,79" "0,84" 0 "0,75" "0,64" "0,7" "0,7" "0,57" 1 "0,5" 1 1 "0,81" 1 "0,81" "0,75" "0,5" 0 "0,5" 1 "0,57" 1 "0,5" "0,67" "0,67" "0,5" 1 "0,33" "0,75" "0,5" "0,67" "0,25" "0,62" "0,73" "0,5" 1 "0,78" "0,25" 1 1 "0,67" "0,18"
|
||||
ATA "0,27" "0,19" "0,5" "0,09" "0,54" "0,36" "0,13" "0,38" "0,17" "0,11" 0 "0,13" "0,26" "0,33" "0,19" "0,17" "0,67" 0 "0,33" "0,21" 0 "0,14" "0,18" "0,13" "0,18" "0,33" "0,13" "0,5" "0,19" "0,4" "0,3" "0,57" "0,24" "0,08" "0,6" "0,33" 0 "0,25" 0 0 "0,48" "0,03"
|
||||
ATT "0,23" "0,14" "0,5" "0,27" "0,15" "0,21" "0,26" "0,58" "0,5" "0,33" "0,6" "0,38" "0,5" "0,67" "0,25" "0,33" "0,33" 1 0 "0,5" "0,67" "0,71" "0,73" "0,38" "0,36" "0,33" "0,75" "0,25" "0,31" "0,2" "0,6" "0,14" "0,48" "0,5" "0,2" "0,67" "0,92" "0,19" "0,25" 0 "0,35" "0,49"
|
||||
ATC "0,5" "0,67" 0 "0,64" "0,31" "0,43" "0,61" "0,04" "0,33" "0,56" "0,4" "0,5" "0,24" 0 "0,56" "0,5" 0 0 "0,67" "0,29" "0,33" "0,14" "0,09" "0,5" "0,45" "0,33" "0,13" "0,25" "0,5" "0,4" "0,1" "0,29" "0,29" "0,42" "0,2" 0 "0,08" "0,56" "0,75" 1 "0,16" "0,49"
|
||||
AAG "0,4" "0,56" "0,8" "0,75" "0,91" "0,71" "0,63" "0,27" "0,67" "0,69" 0 "0,75" "0,61" "0,5" "0,85" "0,61" "0,5" 1 "0,75" 1 "0,33" 0 "0,4" "0,33" 0 "0,25" "0,56" 1 "0,5" "0,5" 1 0 "0,76" 0 "0,78" 0 "0,75" "0,41" 1 "0,95" "0,26" "0,21"
|
||||
AAA "0,6" "0,44" "0,2" "0,25" "0,09" "0,29" "0,37" "0,73" "0,33" "0,31" 0 "0,25" "0,39" "0,5" "0,15" "0,39" "0,5" 0 "0,25" 0 "0,67" 1 "0,6" "0,67" 0 "0,75" "0,44" 0 "0,5" "0,5" 0 1 "0,24" 1 "0,22" 0 "0,25" "0,59" 0 "0,05" "0,74" "0,79"
|
||||
TTG "0,1" "0,08" "0,29" "0,14" "0,13" "0,18" "0,25" "0,2" 0 "0,14" "0,13" "0,11" "0,12" "0,12" "0,18" "0,17" "0,05" "0,5" "0,18" "0,07" "0,07" 0 "0,15" "0,2" "0,14" 0 "0,2" "0,29" "0,24" "0,2" "0,47" "0,33" "0,19" "0,26" "0,3" "0,17" 0 "0,24" 0 0 "0,21" "0,31"
|
||||
TTA 0 "0,02" 0 "0,05" 0 "0,01" 0 "0,03" 0 0 0 0 "0,01" 0 0 "0,01" 0 0 "0,09" 0 "0,13" 0 "0,08" 0 "0,07" "0,18" 0 "0,07" "0,07" 0 "0,05" 0 "0,03" "0,13" "0,04" "0,08" 0 "0,08" 0 0 "0,04" "0,22"
|
||||
CTG "0,4" "0,29" "0,57" "0,22" "0,65" "0,54" "0,5" "0,06" "0,67" "0,52" "0,38" "0,79" "0,28" "0,29" "0,56" "0,24" "0,63" "0,31" "0,36" "0,29" "0,33" 0 "0,08" "0,1" "0,07" "0,27" "0,2" "0,43" "0,45" "0,4" "0,11" "0,33" "0,46" "0,22" "0,52" "0,42" "0,76" "0,26" "0,97" "0,86" "0,15" "0,2"
|
||||
CTA "0,08" "0,14" "0,14" "0,09" "0,05" "0,16" "0,09" "0,34" 0 "0,17" 0 "0,05" "0,18" "0,06" "0,21" "0,21" "0,05" 0 "0,09" "0,07" "0,07" "0,2" "0,23" "0,2" 0 "0,27" "0,2" "0,14" "0,1" 0 0 "0,06" "0,14" 0 "0,04" "0,08" 0 "0,16" 0 0 "0,13" "0,09"
|
||||
CTT "0,22" "0,14" 0 "0,09" "0,1" "0,07" "0,11" "0,23" "0,33" "0,1" "0,13" "0,05" "0,31" "0,12" "0,05" "0,22" "0,16" "0,19" "0,09" "0,36" "0,27" "0,4" "0,23" "0,4" "0,43" "0,27" "0,2" "0,07" "0,1" "0,4" "0,37" "0,28" "0,16" "0,35" "0,09" "0,25" 0 "0,08" "0,03" 0 "0,3" "0,11"
|
||||
CTC "0,2" "0,34" 0 "0,41" "0,07" "0,03" "0,05" "0,14" 0 "0,07" "0,38" 0 "0,09" "0,41" 0 "0,14" "0,11" 0 "0,18" "0,21" "0,13" "0,4" "0,23" "0,1" "0,29" 0 "0,2" 0 "0,03" 0 0 0 "0,03" "0,04" 0 0 "0,24" "0,18" 0 "0,14" "0,17" "0,07"
|
||||
AAT "0,17" "0,15" 1 "0,07" "0,14" "0,06" "0,21" "0,43" "0,17" 0 0 "0,33" "0,37" "0,1" "0,17" "0,12" 0 "0,6" 0 "0,2" "0,5" "0,5" "0,67" "0,38" 0 "0,8" "0,5" "0,57" "0,38" 0 1 1 "0,52" "0,43" "0,4" 1 "0,62" "0,29" 0 0 "0,72" "0,47"
|
||||
AAC "0,83" "0,85" 0 "0,93" "0,86" "0,94" "0,79" "0,57" "0,83" 1 0 "0,67" "0,63" "0,9" "0,83" "0,88" 1 "0,4" 1 "0,8" "0,5" "0,5" "0,33" "0,63" 0 "0,2" "0,5" "0,43" "0,63" 1 0 0 "0,48" "0,57" "0,6" 0 "0,38" "0,71" 1 1 "0,28" "0,53"
|
||||
CCG "0,31" "0,28" 0 "0,47" "0,15" "0,46" "0,24" "0,08" "0,14" "0,27" "0,4" "0,23" "0,07" "0,07" "0,31" "0,31" "0,38" "0,25" "0,45" "0,14" "0,2" 0 0 0 0 "0,08" 0 "0,29" "0,14" 0 0 "0,5" "0,09" "0,24" "0,67" "0,22" 0 "0,55" 0 0 "0,11" "0,64"
|
||||
CCA "0,1" "0,17" 1 "0,09" "0,15" "0,12" "0,14" "0,28" "0,29" "0,09" "0,2" "0,12" "0,21" "0,21" "0,22" "0,15" "0,05" "0,13" "0,1" "0,1" 0 1 "0,67" "0,4" "0,33" "0,31" "0,2" "0,14" "0,21" "0,2" 0 0 "0,23" "0,17" "0,17" 0 "0,6" "0,05" 0 0 "0,32" "0,18"
|
||||
CCT "0,23" "0,16" 0 "0,13" "0,31" "0,07" "0,24" "0,38" 0 "0,12" 0 "0,23" "0,32" 0 "0,16" "0,15" "0,05" "0,13" "0,05" "0,24" "0,2" 0 "0,17" 0 "0,33" "0,15" "0,4" "0,36" "0,21" "0,2" 1 "0,38" "0,27" "0,37" "0,17" "0,67" "0,4" "0,25" "0,35" 0 "0,36" "0,14"
|
||||
CCC "0,36" "0,4" 0 "0,32" "0,38" "0,34" "0,38" "0,26" "0,57" "0,52" "0,4" "0,42" "0,39" "0,71" "0,31" "0,39" "0,52" "0,5" "0,4" "0,52" "0,6" 0 "0,17" "0,6" "0,33" "0,46" "0,4" "0,21" "0,43" "0,6" 0 "0,13" "0,41" "0,22" 0 "0,11" 0 "0,15" "0,65" 1 "0,21" "0,05"
|
||||
CAG "0,79" "0,76" "0,75" "0,78" "0,72" "0,84" "0,77" "0,16" "0,5" "0,87" 1 "0,36" "0,54" "0,83" "0,81" "0,61" "0,64" "0,83" "0,55" "0,73" "0,5" 1 "0,6" 0 1 "0,25" "0,6" "0,71" 1 1 "0,5" "0,4" "0,75" "0,88" "0,91" "0,75" "0,63" "0,65" 1 1 "0,32" "0,3"
|
||||
CAA "0,21" "0,24" "0,25" "0,22" "0,28" "0,16" "0,23" "0,84" "0,5" "0,13" 0 "0,64" "0,46" "0,17" "0,19" "0,39" "0,36" "0,17" "0,45" "0,27" "0,5" 0 "0,4" 1 0 "0,75" "0,4" "0,29" 0 0 "0,5" "0,6" "0,25" "0,13" "0,09" "0,25" "0,38" "0,35" 0 0 "0,68" "0,7"
|
||||
AGG "0,2" "0,09" "0,4" "0,12" "0,11" "0,09" "0,03" "0,1" "0,12" "0,09" "0,12" "0,11" "0,14" "0,09" "0,08" "0,07" "0,29" 0 "0,08" "0,06" "0,09" "0,2" "0,25" 0 "0,33" 0 "0,25" "0,29" "0,29" "0,2" "0,33" "0,13" "0,49" "0,22" "0,14" "0,25" "0,43" "0,36" 0 0 "0,12" 0
|
||||
AGA "0,14" "0,03" "0,6" "0,05" "0,02" "0,06" "0,11" "0,6" "0,02" "0,04" "0,12" 0 "0,2" 0 "0,03" "0,08" "0,12" 0 "0,08" "0,12" "0,09" "0,4" "0,25" "0,25" "0,33" "0,4" "0,13" 0 0 "0,2" "0,22" "0,13" "0,14" "0,33" "0,29" "0,13" "0,43" "0,14" "0,36" 0 "0,41" "0,05"
|
||||
CGG "0,09" "0,1" 0 "0,05" "0,3" "0,26" "0,2" 0 "0,12" "0,11" "0,18" "0,06" "0,09" 0 "0,32" "0,1" "0,06" "0,13" 0 "0,12" "0,27" 0 0 0 0 0 0 "0,21" "0,29" "0,2" "0,11" "0,13" "0,11" "0,11" "0,29" "0,25" 0 "0,21" 0 0 "0,12" 0
|
||||
CGA "0,2" "0,09" 0 "0,05" "0,07" "0,02" "0,03" 0 "0,12" "0,17" "0,06" "0,22" "0,05" "0,09" "0,08" "0,16" "0,18" 0 "0,08" "0,24" 0 0 0 "0,25" "0,17" "0,2" 0 "0,21" "0,13" "0,13" "0,11" "0,13" "0,03" 0 0 0 0 "0,18" 0 0 "0,18" "0,11"
|
||||
CGT "0,09" "0,19" 0 "0,1" "0,07" "0,09" "0,06" 0 "0,05" "0,09" "0,29" "0,22" "0,11" "0,18" "0,08" "0,05" "0,12" "0,25" "0,25" "0,35" "0,09" 0 0 0 0 "0,2" "0,13" "0,14" "0,03" "0,07" 0 "0,25" "0,05" "0,11" "0,07" "0,13" 0 "0,04" 0 0 "0,06" "0,55"
|
||||
CGC "0,29" "0,5" 0 "0,62" "0,43" "0,47" "0,57" "0,3" "0,57" "0,5" "0,24" "0,39" "0,41" "0,64" "0,41" "0,54" "0,24" "0,63" "0,5" "0,12" "0,45" "0,4" "0,5" "0,5" "0,17" "0,2" "0,5" "0,14" "0,26" "0,2" "0,22" "0,25" "0,19" "0,22" "0,21" "0,25" "0,14" "0,07" "0,64" 1 "0,12" "0,29"
|
||||
AGT "0,08" "0,03" 0 0 "0,05" "0,19" "0,1" "0,19" "0,1" "0,11" 0 "0,08" "0,07" "0,15" "0,1" "0,1" "0,1" "0,05" "0,05" "0,14" "0,33" 0 "0,2" "0,2" 0 "0,18" "0,25" "0,18" "0,29" 0 0 "0,18" "0,03" "0,25" "0,13" 0 0 "0,12" 0 0 "0,26" "0,32"
|
||||
AGC "0,21" "0,26" 1 "0,29" "0,68" "0,46" "0,48" "0,12" "0,3" "0,22" 0 "0,5" "0,18" "0,25" "0,34" "0,29" "0,3" "0,27" "0,4" "0,14" "0,33" "0,17" "0,6" 0 "0,33" "0,18" "0,25" "0,18" "0,24" 0 "0,5" "0,27" "0,42" "0,15" "0,25" 0 "0,22" "0,35" 1 "0,7" "0,24" "0,25"
|
||||
TCG "0,08" "0,16" 0 "0,23" 0 "0,1" "0,14" 0 "0,2" "0,06" "0,5" "0,17" "0,12" "0,1" "0,17" "0,12" "0,2" "0,05" "0,15" "0,33" 0 0 0 0 0 0 "0,25" "0,09" 0 "0,38" 0 "0,09" "0,1" "0,1" 0 "0,17" 0 "0,24" 0 0 0 "0,14"
|
||||
TCA 0 "0,14" 0 "0,03" "0,05" "0,04" "0,05" "0,31" 0 "0,11" 0 0 "0,15" "0,1" "0,1" "0,14" "0,1" "0,14" "0,15" "0,14" 0 "0,33" "0,2" 0 0 "0,09" "0,25" 0 0 0 0 "0,09" "0,03" "0,05" "0,06" "0,17" 0 0 0 0 "0,12" "0,1"
|
||||
TCT "0,25" "0,05" 0 "0,1" "0,05" "0,06" "0,07" "0,21" 0 "0,11" 0 "0,13" "0,22" "0,2" "0,12" "0,07" "0,05" "0,23" 0 "0,1" 0 "0,5" 0 "0,6" "0,33" "0,27" 0 "0,45" "0,19" "0,38" "0,5" "0,36" "0,26" "0,35" "0,31" "0,67" "0,67" "0,06" 0 0 "0,24" "0,08"
|
||||
TCC "0,38" "0,36" 0 "0,35" "0,18" "0,15" "0,17" "0,17" "0,4" "0,39" "0,5" "0,13" "0,27" "0,2" "0,17" "0,29" "0,25" "0,27" "0,25" "0,14" "0,33" 0 0 "0,2" "0,33" "0,27" 0 "0,09" "0,29" "0,25" 0 0 "0,16" "0,1" "0,25" 0 "0,11" "0,24" 0 "0,3" "0,15" "0,11"
|
||||
ACG "0,11" "0,12" 0 "0,18" "0,36" "0,24" "0,12" "0,02" "0,15" "0,13" "0,5" "0,13" "0,14" "0,18" "0,24" "0,14" "0,11" "0,23" "0,09" "0,13" 0 1 0 0 "0,14" 0 0 "0,06" "0,28" "0,33" 0 "0,33" "0,07" "0,27" "0,2" 0 0 "0,53" 0 0 0 "0,23"
|
||||
ACA 0 "0,07" 0 "0,06" "0,18" "0,18" "0,12" "0,36" "0,15" "0,16" 0 "0,27" "0,18" "0,09" "0,1" "0,14" "0,32" "0,08" "0,27" "0,2" 0 0 "0,26" "0,56" "0,29" "0,09" "0,08" "0,29" "0,28" "0,17" "0,67" 0 "0,19" "0,18" "0,2" 0 "0,38" 0 0 0 "0,41" "0,26"
|
||||
ACT "0,21" "0,1" 1 "0,09" 0 "0,12" "0,12" "0,36" "0,31" "0,1" 0 "0,07" "0,26" "0,27" "0,1" "0,06" "0,26" "0,23" "0,09" "0,33" "0,33" 0 "0,37" 0 "0,29" "0,55" "0,17" "0,41" "0,22" "0,17" 0 0 "0,19" "0,09" "0,2" "0,25" "0,44" "0,06" "0,29" "0,06" "0,41" "0,07"
|
||||
ACC "0,68" "0,71" 0 "0,68" "0,45" "0,45" "0,65" "0,26" "0,38" "0,61" "0,5" "0,53" "0,42" "0,45" "0,57" "0,66" "0,32" "0,46" "0,55" "0,33" "0,67" 0 "0,37" "0,44" "0,29" "0,36" "0,75" "0,24" "0,22" "0,33" "0,33" "0,67" "0,56" "0,45" "0,4" "0,75" "0,19" "0,41" "0,71" "0,94" "0,19" "0,44"
|
||||
GTG "0,32" "0,36" 1 "0,37" "0,68" "0,74" "0,6" "0,26" "0,76" "0,52" 1 "0,58" "0,45" 0 "0,91" "0,4" "0,17" "0,5" "0,29" "0,5" "0,2" "0,5" "0,38" "0,2" "0,2" "0,33" "0,29" "0,44" "0,65" "0,31" "0,33" "0,38" "0,59" "0,5" "0,29" "0,32" "0,35" "0,54" "0,93" "0,72" "0,23" "0,44"
|
||||
GTA "0,32" "0,18" 0 "0,1" "0,16" "0,09" "0,07" "0,26" "0,06" "0,15" 0 "0,26" "0,17" "0,5" "0,06" "0,16" "0,17" 0 0 "0,2" 0 0 0 "0,4" "0,1" 0 "0,29" 0 "0,09" "0,15" "0,11" 0 "0,26" "0,15" 0 "0,21" 0 "0,18" 0 "0,06" "0,29" "0,11"
|
||||
GTT "0,16" "0,09" 0 "0,1" "0,12" "0,03" "0,07" "0,39" "0,06" "0,15" 0 "0,16" "0,25" "0,25" "0,03" "0,14" "0,33" "0,3" "0,43" "0,1" "0,4" "0,5" "0,5" "0,2" "0,3" "0,5" "0,14" "0,56" "0,22" "0,38" "0,44" "0,38" "0,13" "0,25" "0,29" "0,42" "0,47" "0,18" "0,07" 0 "0,43" "0,18"
|
||||
GTC "0,21" "0,37" 0 "0,43" "0,04" "0,15" "0,25" "0,1" "0,12" "0,18" 0 0 "0,13" "0,25" 0 "0,3" "0,33" "0,2" "0,29" "0,2" "0,4" 0 "0,13" "0,2" "0,4" "0,17" "0,29" 0 "0,04" "0,15" "0,11" "0,25" "0,03" "0,1" "0,43" "0,05" "0,18" "0,11" 0 "0,22" "0,06" "0,27"
|
||||
TAT "0,21" "0,14" 0 "0,1" "0,2" "0,2" "0,09" "0,47" "0,5" "0,33" 0 "0,5" "0,23" "0,29" "0,5" "0,1" "0,5" "0,5" 0 "0,13" "0,33" 1 "0,7" 1 "0,5" "0,4" 0 0 "0,27" "0,25" "0,5" "0,5" "0,4" "0,8" 0 "0,6" "0,55" "0,24" 0 "0,09" "0,59" "0,63"
|
||||
TAC "0,79" "0,86" 1 "0,9" "0,8" "0,8" "0,91" "0,53" "0,5" "0,67" 0 "0,5" "0,77" "0,71" "0,5" "0,9" "0,5" "0,5" 1 "0,88" "0,67" 0 "0,3" 0 "0,5" "0,6" 1 1 "0,73" "0,75" "0,5" "0,5" "0,6" "0,2" 1 "0,4" "0,45" "0,76" 1 "0,91" "0,41" "0,38"
|
||||
@@ -0,0 +1,17 @@
|
||||
Name Length CAI %G+C %G+C(1) %G+C(2) %G+C(3) Nc
|
||||
E1A 870 0.760 54.8 64.1 46.9 53.4 51.9
|
||||
E1B19K 531 0.789 52.5 54.8 41.8 61.0 52.8
|
||||
E1B55K 1491 0.798 52.6 52.7 45.5 59.6 48.5
|
||||
E3_12.5K 324 0.783 54.0 63.9 40.7 57.4 60.1
|
||||
E3_CR1-alpha0 192 0.691 44.3 42.2 45.3 45.3 40.4
|
||||
E3_gp19K 483 0.753 40.0 39.8 37.3 42.9 53.1
|
||||
10.5K 282 0.743 46.5 41.5 44.7 53.2 52.0
|
||||
E3_RID-alpha 276 0.704 46.7 48.9 38.0 53.3 61.0
|
||||
E3_RID-beta 399 0.739 46.1 45.1 48.1 45.1 58.5
|
||||
E3_14.7K 387 0.749 48.8 54.3 35.7 56.6 51.5
|
||||
E4_ORF6/7 453 0.755 51.7 53.6 49.7 51.7 52.9
|
||||
E4_34K_(reversa_complementaria) 885 0.805 53.4 50.5 45.4 64.4 46.9
|
||||
E4_ORF4_(reversa_complementaria) 345 0.714 54.5 55.7 49.6 58.3 60.6
|
||||
E4_ORF3_(reversa_complementaria) 351 0.771 45.0 56.4 29.9 48.7 47.4
|
||||
E4_ORFB_(reversa_complementaria) 393 0.698 48.3 60.3 35.1 49.6 55.6
|
||||
E4_ORF1_(reversa_complementaria) 387 0.708 47.3 60.5 36.4 45.0 43.0
|
||||
File diff suppressed because one or more lines are too long
@@ -0,0 +1,18 @@
|
||||
Name Length CAI %G+C %G+C(1) %G+C(2) %G+C(3) Nc
|
||||
pol 3597 0.760 60.9 63.2 46.1 73.4 43.6
|
||||
pTP 2016 0.772 62.9 66.2 45.2 77.2 41.3
|
||||
52K 1248 0.798 63.3 70.7 43.3 76.0 40.8
|
||||
pIIIa 1758 0.764 62.5 64.2 45.4 78.0 42.7
|
||||
III 1716 0.804 58.7 57.0 44.4 74.8 42.1
|
||||
pVII 597 0.767 70.4 68.8 65.3 76.9 41.7
|
||||
V 1107 0.759 62.3 67.2 49.6 70.2 44.5
|
||||
X 243 0.734 70.0 71.6 61.7 76.5 39.8
|
||||
pVI 753 0.773 61.1 62.2 51.8 69.3 41.5
|
||||
hexon 2859 0.767 49.0 51.6 38.7 56.7 52.4
|
||||
protease 615 0.788 54.8 52.2 45.4 66.8 42.8
|
||||
DBP(reversa_complementaria) 1590 0.769 59.7 60.8 44.3 74.2 42.1
|
||||
100K 2424 0.751 58.5 65.2 42.6 67.6 46.7
|
||||
33K 690 0.708 59.4 62.6 53.0 62.6 49.1
|
||||
22K 591 0.758 61.9 61.9 51.8 72.1 49.8
|
||||
pVIII 684 0.716 57.3 59.6 51.8 60.5 52.5
|
||||
fiber 1746 0.702 44.2 49.7 45.5 37.3 46.6
|
||||
@@ -0,0 +1,37 @@
|
||||
Name Length CAI %G+C %G+C(1) %G+C(2) %G+C(3) Nc
|
||||
E1A 870 0.760 54.8 64.1 46.9 53.4 51.9
|
||||
E1B19K 531 0.789 52.5 54.8 41.8 61.0 52.8
|
||||
E1B55K 1491 0.798 52.6 52.7 45.5 59.6 48.5
|
||||
IX 423 0.783 57.7 55.3 56.7 61.0 49.4
|
||||
IVa2 1350 0.758 56.3 61.3 41.8 65.8 50.0
|
||||
pol 3597 0.760 60.9 63.2 46.1 73.4 43.6
|
||||
pTP 2016 0.772 62.9 66.2 45.2 77.2 41.3
|
||||
52K 1248 0.798 63.3 70.7 43.3 76.0 40.8
|
||||
pIIIa 1758 0.764 62.5 64.2 45.4 78.0 42.7
|
||||
III 1716 0.804 58.7 57.0 44.4 74.8 42.1
|
||||
pVII 597 0.767 70.4 68.8 65.3 76.9 41.7
|
||||
V 1107 0.759 62.3 67.2 49.6 70.2 44.5
|
||||
X 243 0.734 70.0 71.6 61.7 76.5 39.8
|
||||
pVI 753 0.773 61.1 62.2 51.8 69.3 41.5
|
||||
hexon 2859 0.767 49.0 51.6 38.7 56.7 52.4
|
||||
protease 615 0.788 54.8 52.2 45.4 66.8 42.8
|
||||
DBP(reversa_complementaria) 1590 0.769 59.7 60.8 44.3 74.2 42.1
|
||||
100K 2424 0.751 58.5 65.2 42.6 67.6 46.7
|
||||
33K 690 0.708 59.4 62.6 53.0 62.6 49.1
|
||||
22K 591 0.758 61.9 61.9 51.8 72.1 49.8
|
||||
pVIII 684 0.716 57.3 59.6 51.8 60.5 52.5
|
||||
E3_12.5K 324 0.783 54.0 63.9 40.7 57.4 60.1
|
||||
E3_CR1-alpha0 192 0.691 44.3 42.2 45.3 45.3 40.4
|
||||
E3_gp19K 483 0.753 40.0 39.8 37.3 42.9 53.1
|
||||
10.5K 282 0.743 46.5 41.5 44.7 53.2 52.0
|
||||
E3_RID-alpha 276 0.704 46.7 48.9 38.0 53.3 61.0
|
||||
E3_RID-beta 399 0.739 46.1 45.1 48.1 45.1 58.5
|
||||
E3_14.7K 387 0.749 48.8 54.3 35.7 56.6 51.5
|
||||
U_exon(reversa_complementaria) 168 0.830 45.8 50.0 30.4 57.1 30.1
|
||||
fiber 1746 0.702 44.2 49.7 45.5 37.3 46.6
|
||||
E4_ORF6/7 453 0.755 51.7 53.6 49.7 51.7 52.9
|
||||
E4_34K_(reversa_complementaria) 885 0.805 53.4 50.5 45.4 64.4 46.9
|
||||
E4_ORF4_(reversa_complementaria) 345 0.714 54.5 55.7 49.6 58.3 60.6
|
||||
E4_ORF3_(reversa_complementaria) 351 0.771 45.0 56.4 29.9 48.7 47.4
|
||||
E4_ORFB_(reversa_complementaria) 393 0.698 48.3 60.3 35.1 49.6 55.6
|
||||
E4_ORF1_(reversa_complementaria) 387 0.708 47.3 60.5 36.4 45.0 43.0
|
||||
@@ -0,0 +1,36 @@
|
||||
>GFP (WT)
|
||||
ATGAGTAAAGGAGAAGAACTTTTCACTGGAGTTGTCCCAATTCTTGTTGAATTAGATGGTGATGTTAATG *
|
||||
GGCACAAATTCTCTGTCAGTGGAGAGGGTGAAGGTGATGCAACATACGGAAAACTTACCCTTAAATTTAT
|
||||
TTGCACTACTGGAAAGCTACCTGTTCCATGGCCAACACTTGTCACTACTTTCTCTTATGGTGTTCAATGC
|
||||
TTTTCAAGATACCCAGATCATATGAAACAGCATGACTTTTTCAAGAGTGCCATGCCCGAAGGTTATGTAC
|
||||
AGGAAAGAACTATATTTTACAAAGATGACGGGAACTACAAATCACGTGCTGAAGTCAAGTTTGAAGGTGA
|
||||
TACCCTCGTTAATAGAATTGAGTTAAAAGGTATTGATTTTAAAGAAGATGGAAACATTCTTGGACACAAA
|
||||
ATGGAATACAACTATAACTCACACAATGTATACATCATGGCAGACAAACAAAAGAATGGAATCAAAGTTA
|
||||
ACTTCAAAATTAGACACAACATTGAAGATGGAAGCGTTCAACTAGCAGACCATTATCAACAAAATACTCC
|
||||
AATTGGCGATGGCCCTGTCCTTTTACCAGACAACCATTACCTGTCCACACAATCTGCCCTTTCCAAAGAT
|
||||
CCCAACGAAAAGAGAGATCACATGATCCTTCTTGAGTTTGTAACAGCTGCTGGGATTACACATGGCATGG
|
||||
ATGAACTATACAAATAA
|
||||
>TOX (human protein)
|
||||
ATGGACGTAAGATTTTATCCACCTCCAGCCCAGCCCGCCGCTGCGCCCGACGCTCCCTGTCTGGGACCTT
|
||||
CTCCCTGCCTGGACCCCTACTATTGCAACAAGTTTGACGGTGAGAACATGTATATGAGCATGACAGAGCC
|
||||
GAGCCAGGACTATGTGCCAGCCAGCCAGTCCTACCCTGGTCCAAGCCTGGAAAGTGAAGACTTCAACATT
|
||||
CCACCAATTACTCCTCCTTCCCTCCCAGACCACTCGCTGGTGCACCTGAATGAAGTTGAGTCTGGTTACC
|
||||
ATTCTCTGTGTCACCCCATGAACCATAATGGCCTGCTACCATTTCATCCACAAAACATGGACCTCCCTGA
|
||||
AATCACAGTCTCCAATATGCTGGGCCAGGATGGAACACTGCTTTCTAATTCCATTTCTGTGATGCCAGAT
|
||||
ATACGAAACCCAGAAGGAACTCAGTACAGTTCCCATCCTCAGATGGCAGCCATGAGACCAAGGGGCCAGC
|
||||
CTGCAGACATCAGGCAGCAGCCAGGAATGATGCCACATGGCCAGCTGACTACCATTAACCAGTCACAGCT
|
||||
AAGTGCTCAACTTGGTTTGAATATGGGAGGAAGCAATGTTCCCCACAACTCACCATCTCCACCTGGAAGC
|
||||
AAGTCTGCAACTCCTTCACCATCCAGTTCAGTGCATGAAGATGAAGGCGATGATACCTCTAAGATCAATG
|
||||
GTGGAGAGAAGCGGCCTGCCTCTGATATGGGGAAAAAACCAAAAACTCCCAAAAAGAAGAAGAAGAAGGA
|
||||
TCCCAATGAGCCCCAGAAGCCTGTGTCTGCCTATGCGTTATTCTTTCGTGATACTCAGGCCGCCATCAAG
|
||||
GGCCAAAATCCAAACGCTACCTTTGGCGAAGTCTCTAAAATTGTGGCTTCAATGTGGGACGGTTTAGGAG
|
||||
AAGAGCAAAAACAGGTCTATAAAAAGAAAACCGAGGCTGCGAAGAAGGAGTACCTGAAGCAACTCGCAGC
|
||||
ATACAGAGCCAGCCTTGTATCCAAGAGCTACAGTGAACCTGTTGACGTGAAGACATCTCAACCTCCTCAG
|
||||
CTGATCAATTCGAAGCCGTCGGTGTTCCATGGGCCCAGCCAGGCCCACTCGGCCCTGTACCTAAGTTCCC
|
||||
ACTATCACCAACAACCGGGAATGAATCCTCACCTAACTGCCATGCATCCTAGTCTCCCCAGGAACATAGC
|
||||
CCCCAAGCCGAATAACCAAATGCCAGTGACTGTCTCTATAGCAAACATGGCTGTGTCCCCTCCTCCTCCC
|
||||
CTCCAGATCAGCCCGCCTCTTCACCAGCATCTCAACATGCAGCAGCACCAGCCGCTCACCATGCAGCAGC
|
||||
CCCTTGGGAACCAGCTCCCCATGCAGGTCCAGTCTGCCTTACACTCACCCACCATGCAGCAAGGATTTAC
|
||||
TCTTCAACCCGACTATCAGACTATTATCAATCCTACATCTACAGCTGCACAAGTTGTCACCCAGGCAATG
|
||||
GAGTATGTGCGTTCGGGGTGCAGAAATCCTCCCCCACAACCGGTGGACTGGAATAACGACTACTGCAGTA
|
||||
GTGGGGGCATGCAGAGGGACAAAGCACTGTACCTTACTTGA
|
||||
Reference in New Issue
Block a user